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SCO0099 pseudo [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095525, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0099
Gene description
pseudo
Locus tag
SCO0099
Gene type
pseudo
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCJ11.28; SCJ11.29
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Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 82710-83518 SCJ11.28, partial CDS, possible transposase, len: 116aa; similar to many egs. TR:O69846 (EMBL:AL023702) insertion element IS1647 transposase from Streptomyces coelicolor (119 aa) fasta scores; opt: 623, z-score: 791.1, E(): 0, (77.4% identity in 115 aa overlap) and SW:YI22_BURCE insertion element IS402 hypothetical protein (147 aa) fasta scores; opt: 272, z-score: 352.9, E(): 2.7e-12, (39.7% identity in 116 aa overlap).
    SCJ11.29, partial CDS, possible transposase, len: 153aa; similar to many egs. TR:O69847 (EMBL:AL023702) insertion element IS1647 transposase (150 aa) fasta scores; opt: 810, z-score: 999.4, E(): 0, (76.9% identity in 147 aa overlap) and SW:YI21_BURCE insertion element IS402 hypothetical protein from Pseudomonas cepacia (211 aa) fasta scores; opt: 434, z-score: 539.8, E(): 1e-22, (45.1% identity in 153 aa overlap). Contains tta leucine codon, possible target for bldA regulation.;transposase
  • Loc: 83047-83053 Possible site for ribosomal frameshifting.
  • Loc: 83189-83191 tta leucine codon, possible target for bldA regulation.