U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCO0089 transcriptional regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1095517, discontinued on 9-Sep-2022
  • This record was discontinued.
Gene symbol
SCO0089
Gene description
transcriptional regulator
Locus tag
SCO0089
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SCJ11.18
Try the new Gene page
Try the new Transcripts and proteins table
Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 75916-76344 Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family, score 165.40, E-value 9.3e-46
  • Loc: 75958-76050 PS00044 Bacterial regulatory proteins, lysR family signature
Names
transcriptional regulator
NP_624437.1
  • SCJ11.18, probable LysR-family transcriptional regulator, len: 345 aa; similar to many e.g. SW:ALSR_BACSU ALS operon regulator from Bacillus subtilis (302 aa) fasta scores; opt: 507, z-score: 564.5, E(): 4.4e-24, (31.0% identity in 290 aa overlap). Note possible alternative start codons downstream. Contains Pfam match to entry PF00126 HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family and Prosite match to PS00044 Bacterial regulatory proteins, lysR family signature.

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    75856..76893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_624437.1 transcriptional regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.