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carmil3 capping protein regulator and myosin 1 linker 3 [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109532244, updated on 8-Sep-2017

Summary

Gene symbol
carmil3
Gene description
capping protein regulator and myosin 1 linker 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
Orthologs

Genomic context

See carmil3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017806175.1 (5580865..5606204)

NW_017806175.1Genomic Context describing neighboring genes Neighboring gene GTPase IMAP family member 8-like Neighboring gene Fc receptor-like protein 2 Neighboring gene transcription factor Maf-like Neighboring gene GTP-binding protein REM 2-like Neighboring gene phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase

Genomic regions, transcripts, and products

Genomic Sequence:
NW_017806175.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
capping protein, Arp2/3 and myosin-I linker protein 3

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017806175.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    5580865..5606204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019897001.1XP_019752560.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X1

    Conserved Domains (5) summary
    sd00033
    Location:283310
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:252279
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam16000
    Location:7831041
    CARMIL_C; CARMIL C-terminus
    cl25751
    Location:12591484
    DUF4045; Domain of unknown function (DUF4045)
    cl26161
    Location:346629
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
  2. XM_019897002.1XP_019752561.1  capping protein, Arp2/3 and myosin-I linker protein 3 isoform X2

    Conserved Domains (4) summary
    sd00033
    Location:283310
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:252279
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam16000
    Location:7831041
    CARMIL_C; CARMIL C-terminus
    cl26161
    Location:346629
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
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