U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fam163b family with sequence similarity 163, member B [ Mus musculus (house mouse) ]

Gene ID: 109349, updated on 5-Mar-2024

Summary

Official Symbol
Fam163bprovided by MGI
Official Full Name
family with sequence similarity 163, member Bprovided by MGI
Primary source
MGI:MGI:1926106
See related
Ensembl:ENSMUSG00000009216 AllianceGenome:MGI:1926106
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C630035N08Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in Meckel's cartilage and skeleton. Orthologous to human FAM163B (family with sequence similarity 163 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in frontal lobe adult (RPKM 51.2), cortex adult (RPKM 30.7) and 3 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Fam163b in Genome Data Viewer
Location:
2 A3; 2 19.25 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (27000391..27032489, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (27110379..27142477, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene myomaker, myoblast fusion factor Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26934889-26935076 Neighboring gene ADAMTS-like 2 Neighboring gene predicted gene, 36882 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26977601-26977932 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26981648-26981757 Neighboring gene dopamine beta hydroxylase, opposite strand Neighboring gene dopamine beta hydroxylase

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175427.4NP_780636.1  protein FAM163B

    See identical proteins and their annotated locations for NP_780636.1

    Status: VALIDATED

    Source sequence(s)
    AI850964, AK162827
    Consensus CDS
    CCDS38087.1
    UniProtKB/Swiss-Prot
    Q8BUM6
    UniProtKB/TrEMBL
    B2RVN8
    Related
    ENSMUSP00000127556.2, ENSMUST00000151224.3
    Conserved Domains (1) summary
    pfam15069
    Location:1166
    FAM163; FAM163 family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    27000391..27032489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)