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ARHGAP27P1-BPTFP1-KPNA2P3 ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogene [ Homo sapiens (human) ]

Gene ID: 109286553, updated on 23-Nov-2021

Summary

Official Symbol
ARHGAP27P1-BPTFP1-KPNA2P3provided by HGNC
Official Full Name
ARHGAP27P1-BPTFP1-KPNA2P3 readthrough, transcribed pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:52873
See related
Ensembl:ENSG00000215769
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This locus represents naturally-occurring readthrough transcription between multiple unprocessed pseudogene loci. Readthrough transcripts likely do not encode functional proteins. [provided by RefSeq, Dec 2016]
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Genomic context

See ARHGAP27P1-BPTFP1-KPNA2P3 in Genome Data Viewer
Location:
17q24.1
Exon count:
13
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (64749662..64781999, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (62745780..62778117, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene SMAD specific E3 ubiquitin protein ligase 2 Neighboring gene U5 small nuclear ribonucleoprotein 200 kDa helicase pseudogene Neighboring gene MICOS10 pseudogene 2 Neighboring gene karyopherin subunit alpha 2 pseudogene 3 Neighboring gene bromodomain PHD finger transcription factor pseudogene 1 Neighboring gene Rho GTPase activating protein 27 pseudogene 1 Neighboring gene pleckstrin homology and RUN domain containing M1 pseudogene 1 Neighboring gene microRNA 6080 Neighboring gene microRNA 4315-2 Neighboring gene RNA, U7 small nuclear 115 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026899.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK055342, BU608263, DB093141
    Related
    ENST00000578492.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    64749662..64781999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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