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LOC109254156 voltage-dependent R-type calcium channel subunit alpha-1E [ Panthera pardus (leopard) ]

Gene ID: 109254156, updated on 20-Nov-2023

Summary

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Gene symbol
LOC109254156
Gene description
voltage-dependent R-type calcium channel subunit alpha-1E
See related
Ensembl:ENSPPRG00000000086
Gene type
protein coding
RefSeq status
MODEL
Organism
Panthera pardus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
Also known as
CACNA1E
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Genomic context

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Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
RS_2023_02 current ASM2436296v1 (GCF_024362965.1) Unplaced Scaffold NW_026526777.1 (42423219..42717306)
100 previous assembly PanPar1.0 (GCF_001857705.1) Unplaced Scaffold NW_017619849.1 (26273797..26802047, complement)

NW_026526777.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109254206 Neighboring gene uncharacterized LOC128778845 Neighboring gene 60S ribosomal protein L35-like Neighboring gene uncharacterized LOC109254154 Neighboring gene zinc finger protein 648

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent R-type calcium channel subunit alpha-1E
Names
calcium voltage-gated channel subunit alpha1 E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024362965.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2436296v1 Primary Assembly

Genomic

  1. NW_026526777.1 Reference ASM2436296v1 Primary Assembly

    Range
    42423219..42717306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019427913.2 → XP_019283458.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X2

    UniProtKB/TrEMBL
    A0A9V1EK75

  2. XM_053909169.1 → XP_053765144.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X5

    UniProtKB/TrEMBL
    A0A9W2W2P4

  3. XM_019427864.2 → XP_019283409.2  voltage-dependent R-type calcium channel subunit alpha-1E isoform X1

    UniProtKB/TrEMBL
    A0A9V1EK55

  4. XM_053909168.1 → XP_053765143.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X4

    UniProtKB/TrEMBL
    A0A9W2W3E4

  5. XM_053909167.1 → XP_053765142.1  voltage-dependent R-type calcium channel subunit alpha-1E isoform X3

    UniProtKB/TrEMBL
    A0A9W2W2P3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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