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LOC108878561 deoxycytidine kinase 2 [ Lates calcarifer (barramundi perch) ]

Gene ID: 108878561, updated on 10-Apr-2024

Summary

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Gene symbol
LOC108878561
Gene description
deoxycytidine kinase 2
See related
EnsemblRapid:ENSLCAG00010028259
Gene type
protein coding
RefSeq status
MODEL
Organism
Lates calcarifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
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Genomic context

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Location:
chromosome: LG13
Exon count:
7
Annotation release Status Assembly LG Location
RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) LG13 NC_066845.1 (10062259..10065907, complement)
100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017367222.1 (14069231..14072852)

Linkage Group LG13 - NC_066845.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E-binding protein 1 Neighboring gene southpaw Neighboring gene transcobalamin II Neighboring gene coiled-coil domain containing 117

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxynucleoside kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxycytidine kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TLL_Latcal_v3 Primary Assembly

Genomic

  1. NC_066845.1 Reference TLL_Latcal_v3 Primary Assembly

    Range
    10062259..10065907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018669394.2 → XP_018524910.1  deoxycytidine kinase 2

    UniProtKB/TrEMBL
    A0A4W6GAY0
    Related
    ENSLCAP00010079716.1, ENSLCAT00010074797.1
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases