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Lyrm2 LYR motif containing 2 [ Mus musculus (house mouse) ]

Gene ID: 108755, updated on 5-Mar-2024

Summary

Official Symbol
Lyrm2provided by MGI
Official Full Name
LYR motif containing 2provided by MGI
Primary source
MGI:MGI:1917573
See related
Ensembl:ENSMUSG00000045854 AllianceGenome:MGI:1917573
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2610208E05Rik
Summary
Located in mitochondrion. Orthologous to human LYRM2 (LYR motif containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E11.5 (RPKM 19.1), CNS E14 (RPKM 15.5) and 21 other tissues See more
Orthologs
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Genomic context

See Lyrm2 in Genome Data Viewer
Location:
4 A5; 4 14.42 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (32800259..32802268)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (32800259..32802268)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene midasin AAA ATPase 1 Neighboring gene predicted gene, 42267 Neighboring gene ankyrin repeat domain 6 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:32951659-32951860 Neighboring gene STARR-seq mESC enhancer starr_09871 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:32993701-32993916 Neighboring gene enoyl-CoA hydratase domain-containing protein 2, mitochondrial pseudogene Neighboring gene STARR-seq mESC enhancer starr_09876 Neighboring gene ribosomal protein, large, P1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
LYR motif-containing protein 2
Names
novel complex 1 (LYR family) protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175364.4NP_780573.1  LYR motif-containing protein 2

    See identical proteins and their annotated locations for NP_780573.1

    Status: VALIDATED

    Source sequence(s)
    AK044791, BY131987, BY465252
    Consensus CDS
    CCDS38703.1
    UniProtKB/Swiss-Prot
    A2ANY7, Q8R033
    Related
    ENSMUSP00000061451.5, ENSMUST00000062802.5
    Conserved Domains (1) summary
    pfam05347
    Location:2078
    Complex1_LYR; Complex 1 protein (LYR family)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    32800259..32802268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)