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olig3.S oligodendrocyte transcription factor 3 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108717880, updated on 11-Apr-2024

Summary

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Official Symbol
olig3.S
Official Full Name
oligodendrocyte transcription factor 3 S homeolog
Primary source
Xenbase:XB-GENE-17334126
Locus tag
XELAEV_18029098mg
See related
EnsemblRapid:ENSXLAG00005009344
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 5S
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (47868058..47869901)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (47663407..47665456)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene piggyBac transposable element-derived protein 4-like Neighboring gene TNF alpha induced protein 3 S homeolog Neighboring gene uncharacterized LOC121394204 Neighboring gene interferon gamma receptor 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
  
enables E-box binding IEA
Inferred from Electronic Annotation
more info
  
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within axon development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within sensory organ development IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
oligodendrocyte transcription factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    47868058..47869901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018265298.2 → XP_018120787.1  oligodendrocyte transcription factor 3

    UniProtKB/TrEMBL
    A0A1L8G2L6, A0A974HHT2
    Related
    ENSXLAP00005027223.1, ENSXLAT00005027955.1
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases