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mtmr4.S myotubularin related protein 4 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 108709322, updated on 11-Apr-2024

Summary

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Official Symbol
mtmr4.S
Official Full Name
myotubularin related protein 4 S homeolog
Primary source
Xenbase:XB-GENE-17343209
Locus tag
XELAEV_18014534mg
See related
EnsemblRapid:ENSXLAG00005030197
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 2S
Exon count:
20
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (32017116..32074006)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (31106986..31162762)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene claudin 3 S homeolog Neighboring gene caspase 1 S homeolog Neighboring gene 4-hydroxyphenylpyruvate dioxygenase-like Neighboring gene ring finger protein 43 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylinositol-3-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
  
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of autophagy IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
myotubularin-related protein 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    32017116..32074006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018249059.2 → XP_018104548.1  myotubularin-related protein 4-like isoform X2

    UniProtKB/TrEMBL
    A0A1L8H5W3, A0A974DHF2, A0A974DLJ8
    Related
    ENSXLAP00005091156.1, ENSXLAT00005092836.1

  2. XM_018249058.2 → XP_018104547.1  myotubularin-related protein 4-like isoform X1

    UniProtKB/TrEMBL
    A0A8J0UJR0, A0A974DLJ8
    Related
    ENSXLAP00005090694.1, ENSXLAT00005092373.1
Nucleotide Protein Strain
Heading Accession and Version

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