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LINP1 lncRNA in non-homologous end joining pathway 1 [ Homo sapiens (human) ]

Gene ID: 108570035, updated on 13-May-2022

Summary

Official Symbol
LINP1provided by HGNC
Official Full Name
lncRNA in non-homologous end joining pathway 1provided by HGNC
Primary source
HGNC:HGNC:53170
See related
AllianceGenome:HGNC:53170
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LINP1 in Genome Data Viewer
Location:
10p14
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (6737382..6738939)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (6737620..6739177)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (6779344..6780901)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 12587 Neighboring gene PRKCQ antisense RNA 1 Neighboring gene long intergenic non-protein coding RNA 2648 Neighboring gene long intergenic non-protein coding RNA 706 Neighboring gene long intergenic non-protein coding RNA 707 Neighboring gene endogenous retrovirus group K member 6 Env polyprotein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Other Names

  • lncRNA in nonhomologous end joining (NHEJ) pathway 1
  • lncRNA in nonhomologous end joining pathway 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_138480.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL158210, AW466961

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    6737382..6738939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    6737620..6739177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)