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CSF3R colony stimulating factor 3 receptor [ Manis javanica (Malayan pangolin) ]

Gene ID: 108400801, updated on 14-Mar-2024

Summary

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Gene symbol
CSF3R
Gene description
colony stimulating factor 3 receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Manis javanica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Pholidota; Manidae; Manis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current YNU_ManJav_2.0 (GCF_014570535.1) Unplaced Scaffold NW_023436065.1 (1922932..1937271, complement)
100 previous assembly ManJav1.0 (GCF_001685135.1) Unplaced Scaffold NW_016535828.1 (647876..662109)

NW_023436065.1Genomic Context describing neighboring genes Neighboring gene organic solute carrier partner 1 Neighboring gene mitochondrial ribosomal protein S15 Neighboring gene glutamate ionotropic receptor kainate type subunit 3 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables granulocyte colony-stimulating factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immunoglobulin mediated immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granulocyte colony-stimulating factor receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manis javanica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference YNU_ManJav_2.0 Primary Assembly

Genomic

  1. NW_023436065.1 Reference YNU_ManJav_2.0 Primary Assembly

    Range
    1922932..1937271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037021341.1 → XP_036877236.1  granulocyte colony-stimulating factor receptor isoform X4

    Conserved Domains (3) summary
    smart00060
    Location:487 → 567
    FN3; Fibronectin type 3 domain
    cd00063
    Location:202 → 285
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cl21522
    Location:84 → 182
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_037021342.1 → XP_036877237.1  granulocyte colony-stimulating factor receptor isoform X5

    Conserved Domains (4) summary
    smart00060
    Location:462 → 542
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_037021340.1 → XP_036877235.1  granulocyte colony-stimulating factor receptor isoform X3

    Conserved Domains (5) summary
    PHA02682
    Location:651 → 768
    PHA02682; ORF080 virion core protein; Provisional
    smart00060
    Location:525 → 605
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  4. XM_037021338.1 → XP_036877233.1  granulocyte colony-stimulating factor receptor isoform X1

    Conserved Domains (4) summary
    smart00060
    Location:525 → 605
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  5. XM_037021339.1 → XP_036877234.1  granulocyte colony-stimulating factor receptor isoform X1

    Conserved Domains (4) summary
    smart00060
    Location:525 → 605
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  6. XM_017666382.2 → XP_017521871.2  granulocyte colony-stimulating factor receptor isoform X2

    Conserved Domains (4) summary
    smart00060
    Location:525 → 605
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  7. XM_017666381.2 → XP_017521870.2  granulocyte colony-stimulating factor receptor isoform X1

    Conserved Domains (4) summary
    smart00060
    Location:525 → 605
    FN3; Fibronectin type 3 domain
    cd00063
    Location:240 → 323
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:24 → 110
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 220
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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