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ZNF275 zinc finger protein 275 [ Homo sapiens (human) ]

Gene ID: 10838, updated on 23-Nov-2021

Summary

Official Symbol
ZNF275provided by HGNC
Official Full Name
zinc finger protein 275provided by HGNC
Primary source
HGNC:HGNC:13069
See related
Ensembl:ENSG00000063587
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This gene encodes a zinc finger protein that appears to be conserved in eutheria. Its function has not yet been established. [provided by RefSeq, Jul 2010]
Expression
Broad expression in adrenal (RPKM 38.8), ovary (RPKM 27.3) and 24 other tissues See more
Orthologs
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Genomic context

See ZNF275 in Genome Data Viewer
Location:
Xq28
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (153334153..153352926)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (152599611..152618384)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene PWWP domain containing 4 Neighboring gene PNMA family member 6F Neighboring gene microRNA 12129 Neighboring gene uncharacterized LOC105373378 Neighboring gene uncharacterized LOC105373379 Neighboring gene PNMA family member 6E Neighboring gene RNA, 7SL, cytoplasmic 667, pseudogene Neighboring gene ZFP92 zinc finger protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_021432.2 RefSeqGene

    Range
    4999..23772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001080485.4NP_001073954.3  zinc finger protein 275 isoform 2

    See identical proteins and their annotated locations for NP_001073954.3

    Status: VALIDATED

    Source sequence(s)
    AC152007, AC152008, AK122976
    Consensus CDS
    CCDS48188.2
    UniProtKB/TrEMBL
    A6NFS0
    Related
    ENSP00000359271.2, ENST00000370251.3
    Conserved Domains (5) summary
    COG5048
    Location:207273
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:183203
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:103123
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:295315
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:196219
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001367757.1NP_001354686.1  zinc finger protein 275 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC152007, AC152008, BX280482, DA249563, HY052974
    Related
    ENSP00000496975.2, ENST00000650114.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    153334153..153352926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_020636.2: Suppressed sequence

    Description
    NM_020636.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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