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gpd2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108273160, updated on 11-Apr-2024

Summary

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Gene symbol
gpd2
Gene description
glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
See related
Ensembl:ENSIPUG00000021509
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 12 NC_030427.2 (14715666..14755888, complement)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 12 NC_030427.1 (10178080..10218010, complement)

Chromosome 12 - NC_030427.2Genomic Context describing neighboring genes Neighboring gene cytohesin-interacting protein Neighboring gene uncharacterized LOC108272377 Neighboring gene nuclear receptor subfamily 4, group A, member 2b Neighboring gene serine/threonine kinase 24b (STE20 homolog, yeast) Neighboring gene solute carrier family 15 member 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote. Liu S, et al. BMC Genomics, 2012 Nov 5. PMID 23127152, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030427.2 Reference Coco_2.0 Primary Assembly

    Range
    14715666..14755888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017482214.3 → XP_017337703.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2D0S4M7
    Related
    ENSIPUP00000032014.1

  2. XM_017482213.3 → XP_017337702.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2D0S5J2

  3. XM_017482212.3 → XP_017337701.1  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2D0S5J2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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