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meltf melanotransferrin [ Ictalurus punctatus (channel catfish) ]

Gene ID: 108271492, updated on 20-Aug-2024

Summary

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Gene symbol
meltf
Gene description
melanotransferrin
See related
EnsemblRapid:ENSIPUG00020032753
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictalurus punctatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
Also known as
MFI2
Orthologs
human zebrafish all
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Genomic context

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See meltf in Genome Data Viewer
Location:
chromosome: 11
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current Coco_2.0 (GCF_001660625.3) 11 NC_030426.2 (18303411..18315764)
101 previous assembly IpCoco_1.2 (GCF_001660625.2) 11 NC_030426.1 (9510085..9521582, complement)

Chromosome 11 - NC_030426.2Genomic Context describing neighboring genes Neighboring gene prothymosin alpha a Neighboring gene discs large MAGUK scaffold protein 1a Neighboring gene leucine rich repeat containing 40 Neighboring gene leucine rich repeat containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melanotransferrin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001660625.3-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coco_2.0 Primary Assembly

Genomic

  1. NC_030426.2 Reference Coco_2.0 Primary Assembly

    Range
    18303411..18315764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017479087.3 → XP_017334576.1  melanotransferrin

    UniProtKB/TrEMBL
    W5U747
    Related
    ENSIPUP00020059632.1, ENSIPUT00020078855.1

  2. XM_017479086.3 → XP_017334575.1  melanotransferrin

    UniProtKB/TrEMBL
    W5U747
    Related
    ENSIPUP00020059629.1, ENSIPUT00020078852.1
Nucleotide Protein
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Gene LinkOut

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