U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC108229950 cholesterol side-chain cleavage enzyme, mitochondrial [ Kryptolebias marmoratus (mangrove rivulus) ]

Gene ID: 108229950, updated on 10-Apr-2024
Gene symbol
LOC108229950
Gene description
cholesterol side-chain cleavage enzyme, mitochondrial
See related
EnsemblRapid:ENSKMAG00010022964
Gene type
protein coding
RefSeq status
MODEL
Organism
Kryptolebias marmoratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See LOC108229950 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
9
Annotation release Status Assembly LG Location
102 current ASM164957v2 (GCF_001649575.2) LG11 NC_051440.1 (13721674..13725700)
101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094246.1 (4192695..4196061, complement)

Linkage Group LG11 - NC_051440.1Genomic Context describing neighboring genes Neighboring gene photoreceptor-specific nuclear receptor Neighboring gene stomatin (EPB72)-like 1 Neighboring gene signaling receptor and transporter of retinol STRA6 Neighboring gene immunoglobulin superfamily containing leucine-rich repeat 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Identification of 74 cytochrome P450 genes and co-localized cytochrome P450 genes of the CYP2K, CYP5A, and CYP46A subfamilies in the mangrove killifish Kryptolebias marmoratus. Lee BY, et al. BMC Genomics, 2018 Jan 2. PMID 29295707, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C21-steroid hormone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to peptide hormone stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortisol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucocorticoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cholesterol side-chain cleavage enzyme, mitochondrial
Names
cytochrome p450 CYP11A1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM164957v2 Primary Assembly

Genomic

  1. NC_051440.1 Reference ASM164957v2 Primary Assembly

    Range
    13721674..13725700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017405681.3 → XP_017261170.1  cholesterol side-chain cleavage enzyme, mitochondrial

    UniProtKB/TrEMBL
    A0A2L0EBW2
    Related
    ENSKMAP00010049135.1, ENSKMAT00010052428.1
    Conserved Domains (1) summary
    pfam00067
    Location:59 → 516
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases