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G630016G05Rik RIKEN cDNA G630016G05 gene [ Mus musculus (house mouse) ]

Gene ID: 108168785, updated on 8-Feb-2024

Summary

Official Symbol
G630016G05Rikprovided by MGI
Official Full Name
RIKEN cDNA G630016G05 geneprovided by MGI
Primary source
MGI:MGI:3603178
See related
Ensembl:ENSMUSG00000086308 AllianceGenome:MGI:3603178
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in CNS E14 (RPKM 3.0), frontal lobe adult (RPKM 2.7) and 10 other tissues See more
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Genomic context

Location:
2 E5; 2 58.52 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (115897706..115916392)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (116067225..116085911)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene CDAN1 interacting nuclease 1 Neighboring gene predicted gene, 52524 Neighboring gene predicted gene, 31590 Neighboring gene Meis homeobox 2 Neighboring gene STARR-seq mESC enhancer starr_05429 Neighboring gene STARR-seq mESC enhancer starr_05430 Neighboring gene RIKEN cDNA 2810405F15 gene Neighboring gene STARR-seq mESC enhancer starr_05431 Neighboring gene predicted gene, 57693 Neighboring gene STARR-seq mESC enhancer starr_05433 Neighboring gene STARR-seq mESC enhancer starr_05434 Neighboring gene RAB5B, member RAS oncogene family pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_153841.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK144367
    Related
    ENSMUST00000152412.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    115897706..115916392
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)