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Gm35202 predicted gene, 35202 [ Mus musculus (house mouse) ]

Gene ID: 108168745, updated on 8-Feb-2024

Summary

Official Symbol
Gm35202provided by MGI
Official Full Name
predicted gene, 35202provided by MGI
Primary source
MGI:MGI:5594361
See related
Ensembl:ENSMUSG00000085668 AllianceGenome:MGI:5594361
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.1) See more
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Genomic context

Location:
2; 2 B
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (35393536..35396104)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (35503524..35506092)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E11129 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:35351283-35351392 Neighboring gene STARR-positive B cell enhancer ABC_E806 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:35354988-35355189 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:35359725-35359878 Neighboring gene transmembrane emp24 protein transport domain containing 9 pseudogene Neighboring gene predicted gene 13445 Neighboring gene STARR-seq mESC enhancer starr_04284 Neighboring gene predicted gene, 35260 Neighboring gene STARR-seq mESC enhancer starr_04285 Neighboring gene predicted gene 13446 Neighboring gene disabled 2 interacting protein Neighboring gene STARR-seq mESC enhancer starr_04286 Neighboring gene STARR-seq mESC enhancer starr_04289 Neighboring gene STARR-seq mESC enhancer starr_04292 Neighboring gene tubulin tyrosine ligase-like family, member 11 Neighboring gene RIKEN cDNA 9030204H09 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_168303.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL929076
    Related
    ENSMUST00000130083.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    35393536..35396104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)