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LINC02018 long intergenic non-protein coding RNA 2018 [ Homo sapiens (human) ]

Gene ID: 107986100, updated on 23-Nov-2021

Summary

Official Symbol
LINC02018provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2018provided by HGNC
Primary source
HGNC:HGNC:52853
See related
Ensembl:ENSG00000272690
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 1.2), ovary (RPKM 0.5) and 19 other tissues See more
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Genomic context

See LINC02018 in Genome Data Viewer
Location:
3p12.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (75435308..75512177)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (75484459..75561328)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ALG1 like 6, pseudogene Neighboring gene family with sequence similarity 86 member D, pseudogene Neighboring gene Sharpr-MPRA regulatory region 2645 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 10 Neighboring gene RPS3A pseudogene 15

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_151705.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC133041, BM715535, BX505835
  2. NR_151706.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139453, BX505835, CA419141, DA794864
    Related
    ENST00000608169.6
  3. NR_151707.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139453

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    75435308..75512177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021159989.1 Reference GRCh38.p13 PATCHES

    Range
    81955..158824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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