Format

Send to:

Choose Destination

CNTNAP5-DT CNTNAP5 divergent transcript [ Homo sapiens (human) ]

Gene ID: 107985820, updated on 23-Nov-2021

Summary

Official Symbol
CNTNAP5-DTprovided by HGNC
Official Full Name
CNTNAP5 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55794
See related
Ensembl:ENSG00000228400
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CNTNAP5-DT in Genome Data Viewer
Location:
2q14.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (124011934..124025174, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (124769511..124782751, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene PSMD14 pseudogene 1 Neighboring gene uncharacterized LOC107985819 Neighboring gene RN7SK pseudogene 102 Neighboring gene contactin associated protein family member 5 Neighboring gene MT-ND5 pseudogene 22 Neighboring gene RNA, 5S ribosomal pseudogene 102

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_147976.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC079154
    Related
    ENST00000438816.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    124011934..124025174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center