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LINC01705 long intergenic non-protein coding RNA 1705 [ Homo sapiens (human) ]

Gene ID: 107985307, updated on 21-Mar-2023

Summary

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Official Symbol
LINC01705provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1705provided by HGNC
Primary source
HGNC:HGNC:52493
See related
AllianceGenome:HGNC:52493
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ERLR
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC01705 in Genome Data Viewer
Location:
1q41
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (222041704..222059393, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (221281884..221299573, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904517 Neighboring gene long intergenic non-protein coding RNA 2257 Neighboring gene 1q41 HERV-mediated proximal recombination region Neighboring gene long intergenic non-protein coding RNA 2474 Neighboring gene uncharacterized LOC124904518 Neighboring gene family with sequence similarity 183 member E, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Long noncoding RNA ERLR mediates epithelial-mesenchymal transition of retinal pigment epithelial cells and promotes experimental proliferative vitreoretinopathy. Yang S, et al. Cell Death Differ, 2021 Aug. PMID 33664479, Free PMC Article
  2. Identification of differential expression lncRNAs in gastric cancer using transcriptome sequencing and bioinformatics analyses. Wang Y, et al. Mol Med Rep, 2018 Jun. PMID 29693709, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General gene information

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Other Names

  • EMT-related lncRNA in RPE
  • RP11-400N13.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    222041704..222059393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001738485.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    221281884..221299573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071103.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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