U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01705 long intergenic non-protein coding RNA 1705 [ Homo sapiens (human) ]

Gene ID: 107985307, updated on 17-Jun-2024

Summary

Official Symbol
LINC01705provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1705provided by HGNC
Primary source
HGNC:HGNC:52493
See related
AllianceGenome:HGNC:52493
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ERLR
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01705 in Genome Data Viewer
Location:
1q41
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (222041704..222059393, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (221281884..221299573, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904517 Neighboring gene NANOG hESC enhancer GRCh37_chr1:222029846-222030731 Neighboring gene long intergenic non-protein coding RNA 2257 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2573 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:222138826-222139438 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:222144341-222144953 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:222144954-222145565 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:222145566-222146178 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:222146179-222146790 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:222146791-222147403 Neighboring gene 1q41 HERV-mediated proximal recombination region Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:222151877-222152619 Neighboring gene long intergenic non-protein coding RNA 2474 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2574 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr1:222182340-222182872 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:222222797-222223045 Neighboring gene uncharacterized LOC124904518 Neighboring gene MPRA-validated peak711 silencer Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_5024 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:222340292-222341491 Neighboring gene CFAP144 pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    222041704..222059393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001738485.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    221281884..221299573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007071103.1 RNA Sequence