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LINC02625 long intergenic non-protein coding RNA 2625 [ Homo sapiens (human) ]

Gene ID: 107984237, updated on 8-Apr-2022

Summary

Official Symbol
LINC02625provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2625provided by HGNC
Primary source
HGNC:HGNC:54104
See related
AllianceGenome:HGNC:54104
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02625 in Genome Data Viewer
Location:
10q21.2
Exon count:
12
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (61778706..61867945, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (62635561..62724803, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902535 Neighboring gene ciliary associated calcium binding coiled-coil 1 Neighboring gene CRISPRi-validated cis-regulatory element chr10.1925 Neighboring gene Sharpr-MPRA regulatory region 13978 Neighboring gene AT-rich interaction domain 5B Neighboring gene uncharacterized LOC124902435 Neighboring gene Sharpr-MPRA regulatory region 11943

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    61778706..61867945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747461.2 RNA Sequence

  2. XR_001747458.2 RNA Sequence

  3. XR_001747460.2 RNA Sequence

  4. XR_002957081.2 RNA Sequence

  5. XR_002957080.2 RNA Sequence

  6. XR_001747459.2 RNA Sequence

  7. XR_001747463.2 RNA Sequence

  8. XR_001747462.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    62635561..62724803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081340.1 RNA Sequence

  2. XR_007081334.1 RNA Sequence

  3. XR_007081337.1 RNA Sequence

  4. XR_007081336.1 RNA Sequence

  5. XR_007081335.1 RNA Sequence

  6. XR_007081333.1 RNA Sequence

  7. XR_007081339.1 RNA Sequence

  8. XR_007081338.1 RNA Sequence