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LOC107951734 histone H3.3 [ Gossypium hirsutum (cotton) ]

Gene ID: 107951734, updated on 7-Dec-2023

Summary

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Gene symbol
LOC107951734
Gene description
histone H3.3
Locus tag
ERO13_A02G129600v2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium hirsutum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: A02
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) A02 NC_053425.1 (97724245..97727444, complement)
100 previous assembly ASM98774v1 (GCF_000987745.1) 8 NC_030081.1 (44993831..44995380, complement)

Chromosome A02 - NC_053425.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g02750-like Neighboring gene histone H3.3 Neighboring gene uncharacterized LOC107952332 Neighboring gene uncharacterized LOC121209964

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H3.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium hirsutum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gossypium_hirsutum_v2.1 Primary Assembly

Genomic

  1. NC_053425.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Range
    97724245..97727444 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016886874.2 → XP_016742363.1  histone H3.3

    UniProtKB/Swiss-Prot
    Q71V89
    UniProtKB/TrEMBL
    A0A1U8NWL7, A0A1U8PCC5
    Conserved Domains (1) summary
    PTZ00018
    Location:1 → 136
    PTZ00018; histone H3; Provisional
Nucleotide Protein
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