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ZNF271P zinc finger protein 271, pseudogene [ Homo sapiens (human) ]

Gene ID: 10778, updated on 23-Nov-2021

Summary

Official Symbol
ZNF271Pprovided by HGNC
Official Full Name
zinc finger protein 271, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:13065
See related
Ensembl:ENSG00000257267 MIM:604754
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HZF7; ZNFEB; ZNF-EB; ZNF-dp; ZNF271; CT-ZFP48
Summary
Zinc finger proteins interact with nucleic acids and have diverse functions. The zinc finger domain is a conserved amino acid sequence motif containing 2 specifically positioned cysteines and 2 histidines that are involved in coordinating zinc. Kruppel-related proteins form 1 family of zinc finger proteins. See ZFP93 (MIM 604749) for additional information on zinc finger proteins.[supplied by OMIM, Apr 2004]
Expression
Ubiquitous expression in brain (RPKM 7.8), thyroid (RPKM 7.6) and 25 other tissues See more
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Genomic context

See ZNF271P in Genome Data Viewer
Location:
18q12.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (35290272..35310766)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (32870236..32890730)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene microtubule associated protein RP/EB family member 2 Neighboring gene zinc finger protein 397 Neighboring gene zinc finger and SCAN domain containing 30 Neighboring gene uncharacterized LOC107985139 Neighboring gene zinc finger protein 24 Neighboring gene zinc finger protein 396

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • C2H2 (Kruppel-type) zinc finger protein pseudogene
  • EBV-induced zinc finger protein
  • Zinc finger protein HZF7
  • Zinc finger protein ZNFphex133
  • Zinc finger protein dp
  • epstein-barr virus-induced zinc finger protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024565.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC116447, AK023456, BM992306, DA493437
    Related
    ENST00000399070.3
  2. NR_024566.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon, compared to variant 1.
    Source sequence(s)
    AC116447, AF159567, BM992306, DA493437

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    35290272..35310766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_006629.4: Suppressed sequence

    Description
    NM_006629.4: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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