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LOC107776229 chlorophyll a-b binding protein 21, chloroplastic [ Nicotiana tabacum (common tobacco) ]

Gene ID: 107776229, updated on 3-Apr-2024

Summary

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Gene symbol
LOC107776229
Gene description
chlorophyll a-b binding protein 21, chloroplastic
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Nicotiana tabacum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
LHCP; CAB21
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Ntab-TN90 (GCF_000715135.1) Unplaced Scaffold NW_015901544.1 (15779..16750, complement)

NW_015901544.1Genomic Context describing neighboring genes Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015901544.1 Unplaced Scaffold Reference Ntab-TN90 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in photosynthesis, light harvesting in photosystem I IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to light stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in chloroplast thylakoid membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plastoglobule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chlorophyll a-b binding protein 21, chloroplastic
Names
LHCII type I CAB-21

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001425792.1 → NP_001412721.1  chlorophyll a-b binding protein 21, chloroplastic

    Status: VALIDATED

    Source sequence(s)
    CV018960, X52743
    UniProtKB/Swiss-Prot
    P27493
    UniProtKB/TrEMBL
    A0A1S3YD73

RefSeqs of Annotated Genomes: Nicotiana tabacum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntab-TN90 Primary Assembly

Genomic

  1. NW_015901544.1 Reference Ntab-TN90 Primary Assembly

    Range
    15779..16750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016596100.1 → XP_016451586.1  chlorophyll a-b binding protein 21, chloroplastic

    Conserved Domains (1) summary
    PLN00025
    Location:5 → 265
    PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P27493.1 GenPept UniProtKB/Swiss-Prot:P27493

Gene LinkOut

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