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LOC107584872 histone deacetylase 6-like [ Sinocyclocheilus grahami ]

Gene ID: 107584872, updated on 25-Jan-2024

Summary

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Gene symbol
LOC107584872
Gene description
histone deacetylase 6-like
See related
Ensembl:ENSSGRG00000033331
Gene type
protein coding
RefSeq status
MODEL
Organism
Sinocyclocheilus grahami
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Sinocyclocheilus
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Genomic context

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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current SAMN03320097.WGS_v1.1 (GCF_001515645.1) Unplaced Scaffold NW_015505243.1 (519838..532867, complement)

NW_015505243.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107584871 Neighboring gene lipoma HMGIC fusion partner-like 3 protein Neighboring gene trans-acting T-cell-specific transcription factor GATA-3-like Neighboring gene cyclin dependent kinase 20 Neighboring gene host cell factor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505243.1 Unplaced Scaffold Reference SAMN03320097.WGS_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone deacetylase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sinocyclocheilus grahami Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SAMN03320097.WGS_v1.1 Primary Assembly

Genomic

  1. NW_015505243.1 Reference SAMN03320097.WGS_v1.1 Primary Assembly

    Range
    519838..532867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016271634.1 → XP_016127120.1  histone deacetylase 6-like isoform X1

    UniProtKB/TrEMBL
    A0A672MBG0

  2. XM_016271635.1 → XP_016127121.1  histone deacetylase 6-like isoform X1

    UniProtKB/TrEMBL
    A0A672MBG0
    Related
    ENSSGRP00000064822.1, ENSSGRT00000069112.1

  3. XM_016271636.1 → XP_016127122.1  histone deacetylase 6-like isoform X1

    UniProtKB/TrEMBL
    A0A672MBG0

  4. XM_016271637.1 → XP_016127123.1  histone deacetylase 6-like isoform X2

    UniProtKB/TrEMBL
    A0A672MBG0
Nucleotide Protein
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