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CLDN18 claudin 18 [ Miniopterus natalensis ]

Gene ID: 107546080, updated on 30-Mar-2024

Summary

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Gene symbol
CLDN18
Gene description
claudin 18
Gene type
protein coding
RefSeq status
MODEL
Organism
Miniopterus natalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Miniopteridae; Miniopterus
Orthologs
human mouse all
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Genomic context

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See CLDN18 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Mnat.v1 (GCF_001595765.1) Unplaced Scaffold NW_015505103.1 (26350..45862, complement)

NW_015505103.1Genomic Context describing neighboring genes Neighboring gene cysteine-rich PDZ-binding protein pseudogene Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase Neighboring gene SRY-box transcription factor 14 Neighboring gene interleukin 20 receptor subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015505103.1 Unplaced Scaffold Reference Mnat.v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Miniopterus natalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mnat.v1

Genomic

  1. NW_015505103.1 Reference Mnat.v1

    Range
    26350..45862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016224331.1 → XP_016079817.1  claudin-18 isoform X1

    Conserved Domains (1) summary
    cl21598
    Location:7 → 191
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_016224332.1 → XP_016079818.1  claudin-18 isoform X2

    Conserved Domains (1) summary
    cl21598
    Location:8 → 191
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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