U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107469471 cytochrome P450 90A1 [ Arachis duranensis ]

Gene ID: 107469471, updated on 23-Nov-2023
Gene symbol
LOC107469471
Gene description
cytochrome P450 90A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Arachis duranensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis
Try the new Gene page
Try the new Transcripts and proteins table
See LOC107469471 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_02 current aradu.V14167.gnm2.J7QH (GCF_000817695.3) 10 NC_029781.3 (23839706..23843162, complement)
101 previous assembly Aradu1.1 (GCF_000817695.2) A10 NC_029781.2 (24967569..24970893, complement)

Chromosome 10 - NC_029781.3Genomic Context describing neighboring genes Neighboring gene nuclear pore complex protein NUP88 Neighboring gene uncharacterized LOC107469489 Neighboring gene cytochrome P450 90A1 Neighboring gene chlorophyll a-b binding protein CP29.3, chloroplastic

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparisons of de novo transcriptome assemblers in diploid and polyploid species using peanut (Arachis spp.) RNA-Seq data. Chopra R, et al. PLoS One, 2014. PMID 25551607, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brassinosteroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brassinosteroid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cytochrome P450 90A1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000817695.3-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aradu.V14167.gnm2.J7QH Primary Assembly

Genomic

  1. NC_029781.3 Reference aradu.V14167.gnm2.J7QH Primary Assembly

    Range
    23839706..23843162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016088840.3 → XP_015944326.1  cytochrome P450 90A1

    UniProtKB/TrEMBL
    A0A6P4BLS8
    Conserved Domains (1) summary
    cl12078
    Location:2 → 305
    p450; Cytochrome P450
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.