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cubn cubilin [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107382623, updated on 12-Mar-2017

Summary

Gene symbol
cubn
Gene description
cubilin
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs

Genomic context

See cubn in Genome Data Viewer
Location:
chromosome: sgr08
Exon count:
67
Annotation release Status Assembly Chr Location
100 current Nfu_20140520 (GCF_001465895.1) sgr08 NC_029656.1 (26620328..26693988, complement)

Chromosome sgr08 - NC_029656.1Genomic Context describing neighboring genes Neighboring gene STEAP2 metalloreductase Neighboring gene calponin 3 Neighboring gene Ras suppressor protein 1 Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene tRNA aspartic acid methyltransferase 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029656.1 Chromosome sgr08 Reference Nfu_20140520 Primary Assembly

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Nothobranchius furzeri Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nfu_20140520 Primary Assembly

Genomic

  1. NC_029656.1 Reference Nfu_20140520 Primary Assembly

    Range
    26620328..26693988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015954833.1XP_015810319.1  cubilin

    Conserved Domains (5) summary
    cd00041
    Location:15161626
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:428464
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00431
    Location:706815
    CUB; CUB domain
    pfam07645
    Location:253292
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:345380
    EGF_3; EGF domain
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