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LOC107372719 liver-expressed antimicrobial peptide 2 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107372719, updated on 14-Mar-2024

Summary

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Gene symbol
LOC107372719
Gene description
liver-expressed antimicrobial peptide 2
See related
Ensembl:ENSNFUG00015012045
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539921.1 (46256513..46257432)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr02 NC_029650.1 (50161698..50163055)

NW_026539921.1Genomic Context describing neighboring genes Neighboring gene retinoic acid induced 14 Neighboring gene scavenger receptor class B, member 2c Neighboring gene AP-4 complex accessory subunit RUSC2 Neighboring gene uncharacterized si:dkey-106l3.7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
liver-expressed antimicrobial peptide 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539921.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    46256513..46257432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015940924.2 → XP_015796410.1  liver-expressed antimicrobial peptide 2-like

    UniProtKB/TrEMBL
    A0A8C6LQL3, A0A8C6LZH6
    Related
    ENSNFUP00015024931.1
    Conserved Domains (1) summary
    pfam07359
    Location:7 → 72
    LEAP-2; Liver-expressed antimicrobial peptide 2 precursor (LEAP-2)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases