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PMEL premelanosome protein [ Coturnix japonica (Japanese quail) ]

Gene ID: 107325756, updated on 14-Mar-2024
Gene symbol
PMEL
Gene description
premelanosome protein
See related
Ensembl:ENSCJPG00005001777
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Location:
chromosome: LGE22C19W28_E50C23
Exon count:
12
Annotation release Status Assembly LG Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) LGE22C19W28_E50C23 NC_029544.1 (807870..812625, complement)

Linkage Group LGE22C19W28_E50C23 - NC_029544.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 198-like Neighboring gene PYM homolog 1, exon junction complex associated factor Neighboring gene diacylglycerol kinase alpha Neighboring gene cyclin dependent kinase 2 Neighboring gene RAB5B, member RAS oncogene family

Genomic Sequence:
NC_029544.1 Chromosome LGE22C19W28_E50C23 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Nonsense mutation in PMEL is associated with yellowish plumage colour phenotype in Japanese quail. Ishishita S, et al. Sci Rep, 2018 Nov 13. PMID 30425278, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. yellowish plumage may be caused by the reduced eumelanin content in feathers because of the loss of PMEL function
    Title: Nonsense mutation in PMEL is associated with yellowish plumage colour phenotype in Japanese quail.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in melanosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in melanosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
melanocyte protein PMEL

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029544.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    807870..812625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032441057.1 → XP_032296948.1  melanocyte protein PMEL

    UniProtKB/TrEMBL
    A0A3G9DPB1
    Related
    ENSCJPT00005002925.1
    Conserved Domains (3) summary
    TIGR00864
    Location:187 → 322
    PCC; polycystin cation channel protein
    PHA03378
    Location:308 → 414
    PHA03378; EBNA-3B; Provisional
    pfam00801
    Location:232 → 298
    PKD; PKD domain
Nucleotide Protein
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