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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107321925, updated on 8-Apr-2017

Summary

Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs

Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Coturnix japonica 2.0 (GCF_001577835.1) 17 NC_029532.1 (8768906..8877677)

Chromosome 17 - NC_029532.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 43 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene angiopoietin like 2 Neighboring gene uncharacterized LOC107321931 Neighboring gene uncharacterized LOC107321930 Neighboring gene F-box and WD repeat domain containing 2 Neighboring gene solute carrier family 2 member 8

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029532.1 Chromosome 17 Reference Coturnix japonica 2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.0 Primary Assembly

Genomic

  1. NC_029532.1 Reference Coturnix japonica 2.0 Primary Assembly

    Range
    8768906..8877677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015879400.1XP_015734886.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X6

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  2. XM_015879390.1XP_015734876.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  3. XM_015879399.1XP_015734885.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  4. XM_015879397.1XP_015734883.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    Conserved Domains (3) summary
    smart00147
    Location:46259
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:427542
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:426537
    PH; PH domain
  5. XM_015879396.1XP_015734882.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (3) summary
    smart00147
    Location:38273
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:441556
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:440551
    PH; PH domain
  6. XM_015879395.1XP_015734881.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  7. XM_015879401.1XP_015734887.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X7

    Conserved Domains (1) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
  8. XM_015879391.1XP_015734877.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  9. XM_015879394.1XP_015734880.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  10. XM_015879393.1XP_015734879.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  11. XM_015879398.1XP_015734884.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

    Conserved Domains (3) summary
    smart00147
    Location:22240
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:408523
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:407518
    PH; PH domain
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