U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107276219 serine decarboxylase 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 107276219, updated on 12-Jul-2024
Gene symbol
LOC107276219
Gene description
serine decarboxylase 2
Locus tag
OSNPB_110473832
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See LOC107276219 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 11 NC_089045.1 (18215104..18217905)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 11 NC_029266.1 (16353477..16357597)

Chromosome 11 - NC_089045.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4350497 Neighboring gene ubiquitin carboxyl-terminal hydrolase 5 Neighboring gene uncharacterized LOC4350501 Neighboring gene disease resistance protein RGA2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbon-carbon lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
serine decarboxylase 2
Names
Os11g0473832

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089045.1 Reference ASM3414082v1 Primary Assembly

    Range
    18215104..18217905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026021245.2 → XP_025877030.1  serine decarboxylase 2

    UniProtKB/TrEMBL
    A0A0P0Y215
    Conserved Domains (1) summary
    PLN02263
    Location:31 → 442
    PLN02263; serine decarboxylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases