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WSB1 WD repeat and SOCS box containing 1 [ Parus major (Great Tit) ]

Gene ID: 107212977, updated on 8-Apr-2017

Summary

Gene symbol
WSB1
Gene description
WD repeat and SOCS box containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs

Genomic context

See WSB1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Parus_major1.1 (GCF_001522545.2) 19 NC_031787.1 (9090706..9099856)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 19 NC_029287.1 (9090706..9099861)

Chromosome 19 - NC_031787.1Genomic Context describing neighboring genes Neighboring gene neurofibromin 1 Neighboring gene ecotropic viral integration site 2B Neighboring gene oligodendrocyte myelin glycoprotein Neighboring gene kinase suppressor of ras 1 Neighboring gene nitric oxide synthase 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
WD repeat and SOCS box-containing protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Parus major Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031787.1 Reference Parus_major1.1 Primary Assembly

    Range
    9090706..9099856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015646937.2XP_015502423.1  WD repeat and SOCS box-containing protein 1

    Conserved Domains (4) summary
    COG2319
    Location:132375
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:128372
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cd03746
    Location:375414
    SOCS_WSB1_SWIP1; SOCS (suppressors of cytokine signaling) box of WSB1/SWiP1-like proteins. This subfamily contains WSB-1 (SOCS-box-containing WD-40 protein), part of an E3 ubiquitin ligase for the thyroid-hormone-activating type 2 iodothyronine deiodinase (D2) and SWiP-1 ...
    sd00039
    Location:127161
    7WD40; WD40 repeat [structural motif]
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