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AMOTL1 angiomotin like 1 [ Parus major (Great Tit) ]

Gene ID: 107212229, updated on 8-Apr-2017

Summary

Gene symbol
AMOTL1
Gene description
angiomotin like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs

Genomic context

See AMOTL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Parus_major1.1 (GCF_001522545.2) 1 NC_031768.1 (77465016..77531393, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1 NC_029268.1 (77465016..77531393, complement)

Chromosome 1 - NC_031768.1Genomic Context describing neighboring genes Neighboring gene endonuclease domain containing 1 Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene chromosome 1 C11orf97 homolog Neighboring gene fucosyltransferase 4

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Parus major Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031768.1 Reference Parus_major1.1 Primary Assembly

    Range
    77465016..77531393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015645262.1XP_015500748.1  angiomotin-like protein 1 isoform X1

    Conserved Domains (3) summary
    pfam10458
    Location:566631
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:616818
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:456640
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  2. XM_015645275.1XP_015500761.1  angiomotin-like protein 1 isoform X3

    Conserved Domains (3) summary
    pfam10458
    Location:535600
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:585787
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:425609
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  3. XM_015645283.2XP_015500769.1  angiomotin-like protein 1 isoform X4

    Conserved Domains (3) summary
    pfam10458
    Location:534599
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:584786
    Angiomotin_C; Angiomotin C terminal
    cl02488
    Location:424608
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
  4. XM_015645270.2XP_015500756.1  angiomotin-like protein 1 isoform X2

    Conserved Domains (2) summary
    pfam10458
    Location:542607
    Val_tRNA-synt_C; Valyl tRNA synthetase tRNA binding arm
    pfam12240
    Location:592794
    Angiomotin_C; Angiomotin C terminal
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