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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Parus major (Great Tit) ]

Gene ID: 107211970, updated on 15-Feb-2018

Summary

Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus
Orthologs

Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
27
Annotation release Status Assembly Chr Location
101 current Parus_major1.1 (GCF_001522545.2) 17 NC_031785.1 (95107..197416, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 17 NC_029285.1 (92411..197416, complement)

Chromosome 17 - NC_031785.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107211971 Neighboring gene F-box and WD repeat domain containing 2 Neighboring gene angiopoietin like 2 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene LIM homeobox transcription factor 1 beta Neighboring gene uncharacterized LOC109022893

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Parus major Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031785.1 Reference Parus_major1.1 Primary Assembly

    Range
    95107..197416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015644594.2XP_015500080.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  2. XM_015644596.2XP_015500082.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  3. XM_015644597.2XP_015500083.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  4. XM_015644599.2XP_015500085.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:457568
    PH; PH domain
  5. XM_015644593.2XP_015500079.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  6. XM_015644595.2XP_015500081.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  7. XM_015644598.2XP_015500084.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:465580
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:464575
    PH; PH domain
  8. XM_015644600.1XP_015500086.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

    Conserved Domains (1) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
  9. XM_015644603.1XP_015500089.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

    Conserved Domains (1) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases

RNA

  1. XR_001524353.1 RNA Sequence

  2. XR_001524354.1 RNA Sequence

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