Format

Send to:

Choose Destination

Per1 period circadian regulator 1 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107158022, updated on 16-Apr-2019

Summary

Gene symbol
Per1
Gene description
period circadian regulator 1
See related
Ensembl:ENSMMMG00000020158
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs

Genomic context

See Per1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
100 current marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351302.1 (1364449..1379521, complement)

NW_015351302.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene vesicle associated membrane protein 2 Neighboring gene transmembrane protein 107

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015351302.1 Unplaced Scaffold Reference marMar2.1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
period circadian protein homolog 1
Names
period circadian clock 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar2.1

Genomic

  1. NW_015351302.1 Reference marMar2.1

    Range
    1364449..1379521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015504454.1XP_015359940.1  period circadian protein homolog 1

    Conserved Domains (3) summary
    cd00130
    Location:360461
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam08447
    Location:373457
    PAS_3; PAS fold
    pfam12114
    Location:10831224
    Period_C; Period protein 2/3C-terminal region
  2. XM_015504455.1XP_015359941.1  period circadian protein homolog 1

    Related
    ENSMMMP00000023084.1, ENSMMMT00000026149.1
    Conserved Domains (3) summary
    cd00130
    Location:360461
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam08447
    Location:373457
    PAS_3; PAS fold
    pfam12114
    Location:10831224
    Period_C; Period protein 2/3C-terminal region
  3. XM_015504453.1XP_015359939.1  period circadian protein homolog 1

    Conserved Domains (3) summary
    cd00130
    Location:360461
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam08447
    Location:373457
    PAS_3; PAS fold
    pfam12114
    Location:10831224
    Period_C; Period protein 2/3C-terminal region
Support Center