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Arhgap42 Rho GTPase activating protein 42 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107145915, updated on 12-Mar-2017

Summary

Gene symbol
Arhgap42
Gene description
Rho GTPase activating protein 42
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs

Genomic context

See Arhgap42 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351235.1 (21576294..21849028, complement)

NW_015351235.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 6 Neighboring gene progesterone receptor Neighboring gene contactin 5 Neighboring gene mitochondrial import inner membrane translocase subunit Tim23 pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015351235.1 Unplaced Scaffold Reference marMar2.1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
rho GTPase-activating protein 42

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar2.1

Genomic

  1. NW_015351235.1 Reference marMar2.1

    Range
    21576294..21849028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015489960.1XP_015345446.1  rho GTPase-activating protein 42

    Conserved Domains (5) summary
    cd07634
    Location:19225
    BAR_GAP10-like; The Bin/Amphiphysin/Rvs (BAR) domain of Rho GTPase activating protein 10-like
    cd12066
    Location:820874
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd04374
    Location:369567
    RhoGAP_Graf; RhoGAP_Graf: GTPase-activator protein (GAP) domain for Rho-like GTPases found in GRAF (GTPase regulator associated with focal adhesion kinase); Graf is a multi-domain protein, containing SH3 and PH domains, that binds focal adhesion kinase and influences ...
    cd01249
    Location:267376
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    pfam00169
    Location:267369
    PH; PH domain
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