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clgn calmegin [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107093254, updated on 13-Oct-2018

Summary

Gene symbol
clgn
Gene description
calmegin
See related
Ensembl:ENSCVAG00000001097
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs

Genomic context

See clgn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150869.1 (389465..401249)

NW_015150869.1Genomic Context describing neighboring genes Neighboring gene high affinity choline transporter 1-like Neighboring gene exosome component 9 Neighboring gene short coiled-coil protein Neighboring gene mastermind like transcriptional coactivator 3

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015150869.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150869.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    389465..401249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015388208.1XP_015243694.1  calmegin isoform X2

    Conserved Domains (1) summary
    pfam00262
    Location:99468
    Calreticulin; Calreticulin family
  2. XM_015388207.1XP_015243693.1  calmegin isoform X1

    Related
    ENSCVAP00000000211.1, ENSCVAT00000015450.1
    Conserved Domains (1) summary
    pfam00262
    Location:99468
    Calreticulin; Calreticulin family
  3. XM_015388206.1XP_015243692.1  calmegin isoform X1

    Conserved Domains (1) summary
    pfam00262
    Location:99468
    Calreticulin; Calreticulin family
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