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carmil3 capping protein regulator and myosin 1 linker 3 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107087704, updated on 12-Mar-2017

Summary

Gene symbol
carmil3
Gene description
capping protein regulator and myosin 1 linker 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs

Genomic context

See carmil3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150645.1 (134816..266030, complement)

NW_015150645.1Genomic Context describing neighboring genes Neighboring gene NOP9 nucleolar protein Neighboring gene RRAD and GEM like GTPase 2 Neighboring gene cadherin 24 Neighboring gene proteasome subunit beta 5

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015150645.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
leucine-rich repeat-containing protein 16B

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150645.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    134816..266030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015379428.1XP_015234914.1  leucine-rich repeat-containing protein 16B

    Conserved Domains (4) summary
    cd00116
    Location:346639
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:284310
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:252276
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam16000
    Location:7831044
    CARMIL_C; CARMIL C-terminus
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