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VARS2 valyl-tRNA synthetase 2, mitochondrial [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 106997888, updated on 13-Mar-2024

Summary

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Official Symbol
VARS2provided by VGNC
Official Full Name
valyl-tRNA synthetase 2, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:83965
See related
Ensembl:ENSMMUG00000018609
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
31
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (138995387..139007847, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (31606996..31619249)

Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677648 Neighboring gene mucin like 3 Neighboring gene surfactant associated 2 Neighboring gene general transcription factor IIH subunit 4 Neighboring gene discoidin domain receptor tyrosine kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables valine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in valyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
valine--tRNA ligase, mitochondrial
Names
valyl-tRNA synthetase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041757.1 Reference Mmul_10 Primary Assembly

    Range
    138995387..139007847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015135892.2 → XP_014991378.2  valine--tRNA ligase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    H9EWP0
    Conserved Domains (1) summary
    PTZ00419
    Location:86 → 1013
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional

  2. XM_015135890.2 → XP_014991376.2  valine--tRNA ligase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    H9EWP0
    Conserved Domains (1) summary
    PTZ00419
    Location:86 → 1013
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional

  3. XM_028847743.1 → XP_028703576.1  valine--tRNA ligase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    H9EWP0
    Conserved Domains (1) summary
    PTZ00419
    Location:104 → 1031
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional

  4. XM_015135891.2 → XP_014991377.2  valine--tRNA ligase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    H9EWP0
    Conserved Domains (1) summary
    PTZ00419
    Location:86 → 1013
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional

  5. XM_015135889.2 → XP_014991375.2  valine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    F7BX36, H9EWP0
    Related
    ENSMMUP00000034137.3, ENSMMUT00000041101.3
    Conserved Domains (1) summary
    PTZ00419
    Location:133 → 1060
    PTZ00419; valyl-tRNA synthetase-like protein; Provisional
Nucleotide Protein
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