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sbds SBDS ribosome maturation factor [ Poecilia mexicana ]

Gene ID: 106920976, updated on 13-Mar-2024
Gene symbol
sbds
Gene description
SBDS ribosome maturation factor
See related
Ensembl:ENSPMEG00000019483
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
all
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See sbds in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094512.1 (822728..825771, complement)

NW_015094512.1Genomic Context describing neighboring genes Neighboring gene claudin-4-like Neighboring gene claudin-4-like Neighboring gene claudin-4-like Neighboring gene tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) Neighboring gene uncharacterized LOC106922948

Genomic Sequence:
NW_015094512.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytosolic ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribosome maturation protein SBDS
Names
SBDS, ribosome assembly guanine nucleotide exchange factor

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094512.1 Reference P_mexicana-1.0

    Range
    822728..825771 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014992386.1 → XP_014847872.1  ribosome maturation protein SBDS

    UniProtKB/TrEMBL
    A0A3B3XP82
    Related
    ENSPMEP00000016750.1, ENSPMET00000025422.1
    Conserved Domains (3) summary
    COG1500
    Location:9 → 241
    Sdo1; Ribosome maturation protein Sdo1 [Translation, ribosomal structure and biogenesis]
    pfam01172
    Location:17 → 98
    SBDS; Shwachman-Bodian-Diamond syndrome (SBDS) protein
    pfam09377
    Location:107 → 224
    SBDS_C; SBDS protein C-terminal domain
Nucleotide Protein
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