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ATG101 autophagy related 101 [ Calidris pugnax (ruff) ]

Gene ID: 106891141, updated on 8-Apr-2017

Summary

Gene symbol
ATG101
Gene description
autophagy related 101
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs

Genomic context

See ATG101 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090886.1 (906263..908747)

NW_015090886.1Genomic Context describing neighboring genes Neighboring gene general receptor for phosphoinositides 1 associated scaffold protein Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene formin like 3 Neighboring gene transmembrane BAX inhibitor motif containing 6

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015090886.1 Unplaced Scaffold Reference ASM143184v1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090886.1 Reference ASM143184v1

    Range
    906263..908747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014947458.1XP_014802944.1  autophagy-related protein 101 isoform X2

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    DUF1649; Protein of unknown function (DUF1649)
  2. XM_014947457.1XP_014802943.1  autophagy-related protein 101 isoform X1

    Conserved Domains (1) summary
    pfam07855
    Location:27190
    DUF1649; Protein of unknown function (DUF1649)
  3. XM_014947459.1XP_014802945.1  autophagy-related protein 101 isoform X2

    Conserved Domains (1) summary
    pfam07855
    Location:9172
    DUF1649; Protein of unknown function (DUF1649)
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