Smim3 small integral membrane protein 3 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Smim3provided by MGI
Official Full Name: small integral membrane protein 3provided by MGI
Primary source: MGI:MGI:1917088
See related: Ensembl:ENSMUSG00000038059 AllianceGenome:MGI:1917088
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Nid67; cI-41; 2010002N04Rik
Summary: Predicted to enable identical protein binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver left lobe; liver right lobe; and thyroid gland. Orthologous to human SMIM3 (small integral membrane protein 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in ovary adult (RPKM 8.4), lung adult (RPKM 8.1) and 26 other tissues See more
Orthologs: human all
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Genomic context

Location:: 18; 18 D3

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
109	current	GRCm39 (GCF_000001635.27)	18	NC_000084.7 (60607263..60635055, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	18	NC_000084.6 (60474191..60518949, complement)

Chromosome 18 - NC_000084.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Gene trapped (1)
Targeted (1) 1 citation
Endonuclease-mediated (2)

General gene information

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Homology

Homologs of the Smim3 gene: The Smim3 gene is conserved in human, chimpanzee, dog, cow, and rat.
Orthologs from Annotation Pipeline: 336 organisms have orthologs with human gene Smim3

Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables identical protein binding	ISO Inferred from Sequence Orthology more info
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small integral membrane protein 3

Names: NGF-induced differentiation clone 67 protein; putative small membrane protein NID67; small membrane protein NID67

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.