U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HTR2C 5-hydroxytryptamine receptor 2C [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737647, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HTR2C
Gene description
5-hydroxytryptamine receptor 2C
Locus tag
Y1Q_0009318
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 8 NC_081831.1 (82396576..82766757, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711293.1 (238663..728911)

Chromosome 8 - NC_081831.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeats and calponin homology domain containing 2 Neighboring gene interleukin 13 receptor subunit alpha 2 Neighboring gene uncharacterized LOC132252185 Neighboring gene uncharacterized LOC132252184 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 2 Neighboring gene discs large MAGUK scaffold protein 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled serotonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
5-hydroxytryptamine receptor 2C

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081831.1 Reference rAllMis1 Primary Assembly

    Range
    82396576..82766757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059732933.1 → XP_059588916.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    A0A151N7D9

  2. XM_059732931.1 → XP_059588914.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    A0A151N7D9

  3. XM_059732934.1 → XP_059588917.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    A0A151N7D9

  4. XM_059732930.1 → XP_059588913.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    A0A151N7D9

  5. XM_059732932.1 → XP_059588915.1  5-hydroxytryptamine receptor 2C isoform X1

    UniProtKB/TrEMBL
    A0A151N7D9

  6. XM_059732935.1 → XP_059588918.1  5-hydroxytryptamine receptor 2C isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.