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RNA5-8SN1 RNA, 5.8S ribosomal N1 [ Homo sapiens (human) ]

Gene ID: 106632260, updated on 23-Nov-2021

Summary

Official Symbol
RNA5-8SN1provided by HGNC
Official Full Name
RNA, 5.8S ribosomal N1provided by HGNC
Primary source
HGNC:HGNC:53517
See related
Ensembl:ENSG00000278189
Gene type
rRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNA5-8S4
Summary
45S ribosomal DNA (rDNA) arrays, or clusters, are present on human chromosomes 13, 14, 15, 21 and 22, designated RNR1 through RNR5, respectively. Each cluster consists of multiple 45S rDNA repeat units, that vary in number among individuals and chromosomes, with total diploid copy number estimates ranging from 60 to >800 repeat units in a human genome. The 45S rDNA repeat unit encodes a 45S rRNA precursor, transcribed by RNA polymerase I, which is processed to form the 18S, 5.8S and 28S rRNAs. Gene and RefSeq, in collaboration with HGNC, currently describe one 45S rDNA cluster, and one set of 45S precursor and product rRNAs, for each of the five human chromosomes to which these loci are localized. This gene is a representative copy of the 5.8S ribosomal RNA on chromosome 21. [provided by RefSeq, Feb 2017]
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Genomic context

See RNA5-8SN1 in Genome Data Viewer
Location:
21p11.2
Exon count:
1
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 21 NC_000021.9 (8439822..8439978)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene RNA, 45S pre-ribosomal N1 Neighboring gene microRNA 10396b Neighboring gene RNA, 18S ribosomal N1 Neighboring gene RNA, 28S ribosomal N1 Neighboring gene uncharacterized LOC105379507

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_145821.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    FP236383
    Related
    ENST00000619471.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p13 Primary Assembly

    Range
    8439822..8439978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160023.1 Reference GRCh38.p13 PATCHES

    Range
    486947..487103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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