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LOC106612856 NAD(+) hydrolase SARM1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106612856, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106612856
Gene description
NAD(+) hydrolase SARM1
See related
Ensembl:ENSSSAG00000064075
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106612856 in Genome Data Viewer
Location:
chromosome: ssa09
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa09 NC_059450.1 (128283295..128296639)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa09 NC_027308.1 (111578820..111592524)

Chromosome ssa09 - NC_059450.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor class F member 1-like Neighboring gene uncharacterized LOC123724146 Neighboring gene solute carrier family 46 member 1 Neighboring gene uncharacterized LOC106612858 Neighboring gene solute carrier family 13 member 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ nucleosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of MyD88-independent toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to axon injury IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAD(+) hydrolase SARM1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059450.1 Reference Ssal_v3.1

    Range
    128283295..128296639
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045724541.1 → XP_045580497.1  NAD(+) hydrolase SARM1

    Related
    ENSSSAP00000155545.1, ENSSSAT00000233394.1
Nucleotide Protein
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