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plaa phospholipase A2 activating protein [ Austrofundulus limnaeus ]

Gene ID: 106514877, updated on 1-Aug-2017

Summary

Gene symbol
plaa
Gene description
phospholipase A2 activating protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See plaa in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952425.1 (3135283..3143956)

NW_013952425.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 2 Neighboring gene zinc finger DHHC-type containing 21 Neighboring gene HAUS augmin like complex subunit 6 Neighboring gene nuclear factor I B

Genomic regions, transcripts, and products

Genomic Sequence:
NW_013952425.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
phospholipase A-2-activating protein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952425.1 Reference Austrofundulus_limnaeus-1.0

    Range
    3135283..3143956
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014004401.1XP_013859855.1  phospholipase A-2-activating protein

    Conserved Domains (5) summary
    COG2319
    Location:3303
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:9297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08324
    Location:536791
    PUL; PUL domain
    pfam09070
    Location:346456
    PFU; PFU (PLAA family ubiquitin binding)
    sd00039
    Location:113149
    7WD40; WD40 repeat [structural motif]
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