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RNU6-1098P RNA, U6 small nuclear 1098, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481935, updated on 4-Mar-2025

Summary

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Official Symbol
RNU6-1098Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1098, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48061
See related
Ensembl:ENSG00000252581 AllianceGenome:HGNC:48061
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-1098P in Genome Data Viewer
Location:
3q25.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (149525631..149525726)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (152276866..152276961)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (149243418..149243513)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:149181411-149181912 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:149181913-149182412 Neighboring gene FKBP prolyl isomerase 1A pseudogene 4 Neighboring gene Sharpr-MPRA regulatory region 13408 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14803 Neighboring gene Sharpr-MPRA regulatory region 15242 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14804 Neighboring gene transmembrane 4 L six family member 4 Neighboring gene Sharpr-MPRA regulatory region 15061 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 45 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14805 Neighboring gene WW domain containing transcription regulator 1 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr3:149291956-149292582 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:149292583-149293209 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:149293210-149293836 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:149322409-149323099 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:149369611-149370110 Neighboring gene Sharpr-MPRA regulatory region 14320 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:149375639-149376218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20682 Neighboring gene WWTR1 intronic transcript 1 Neighboring gene WWTR1 antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043029.1 

    Range
    101..196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    149525631..149525726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    152276866..152276961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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