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RNVU1-22 RNA, variant U1 small nuclear 22 [ Homo sapiens (human) ]

Gene ID: 106481627, updated on 10-Dec-2024

Summary

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Official Symbol
RNVU1-22provided by HGNC
Official Full Name
RNA, variant U1 small nuclear 22provided by HGNC
Primary source
HGNC:HGNC:48462
See related
Ensembl:ENSG00000199879 AllianceGenome:HGNC:48462
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU1-120P
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Genomic context

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See RNVU1-22 in Genome Data Viewer
Location:
1q21.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148263476..148263632)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146543794..146543950, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147735751..147735907)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 57 Neighboring gene uncharacterized LOC101927468 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147691416-147691917 Neighboring gene NANOG hESC enhancer GRCh37_chr1:147710223-147710724 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:147735767-147736426 Neighboring gene Sharpr-MPRA regulatory region 3868 Neighboring gene tRNA-Gln (anticodon CTG) 4-1 Neighboring gene long intergenic non-protein coding RNA 1731 Neighboring gene long intergenic non-protein coding RNA 2806

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, U1 small nuclear 120, pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044643.1 

    Range
    101..257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    148263476..148263632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    146543794..146543950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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